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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
UCEC rs12050634 chr15:33759900 T/C 0.000108 123 13.2 14.1 12.57 KM Plot
UCEC rs12446102 chr16:3730461 G/A 0.000164 119 12.67 13.37 18.42 KM Plot
UCEC rs12448212 chr16:3636809 G/C 8.96E-5 122 12.92 15.53 18.42 KM Plot
UCEC rs12933120 chr16:3634746 A/C 0.000146 125 18.42 14.03 12.92 KM Plot
UCEC rs12990302 chr2:48831133 G/C 2.5E-5 123 14.9 14.17 2.47 KM Plot
UCEC rs13012081 chr2:48827148 G/C 2.04E-6 123 14.78 13.33 6.33 KM Plot
UCEC rs13016779 chr2:48831266 T/G 2.5E-5 123 14.9 14.17 2.47 KM Plot
UCEC rs13105878 chr4:111718147 C/A 6.78E-5 124 14.88 4.73 6.3 KM Plot
UCEC rs13125644 chr4:111725901 G/A 6.78E-5 124 14.87 8.1 6.3 KM Plot
UCEC rs138266817 chr2:201908361 A/G 9.18E-5 122 13.33 25.13 7.65 KM Plot
UCEC rs139023883 chr20:25668974 T/TACAG 9.97E-6 125 13.7 17.1 6.65 KM Plot
UCEC rs141200870 chr20:25664704 T/C 9.97E-6 125 13.7 17.1 6.65 KM Plot
UCEC rs16837368 chr1:156373583 C/T 5.44E-7 125 14.17 15.23 5.83 KM Plot
UCEC rs16872131 chr8:106003018 C/T 1.02E-11 125 14.88 8.53 2.4 KM Plot
UCEC rs17354185 chr15:82426170 C/G 1.15E-7 125 1.67 13.37 14.87 KM Plot